# Cohort What is in the rig, and what each patient is for. **Generated. Do not edit by hand** -- run `./regenerate-cohort.sh` and commit the result. The same rows are served live at `/` as a table and at `/_fake/cohort` as JSON. This file says what was baked in; those say what is there now. | handle | fhir id | identifier | name | dob | diagnosis | resources | origin | staged for | |-----------------|------------------------|------------|--------------------------------------|------------|------------------------------------------------------------------------------------------------------------------------------------------|------------------------------------------------------------------------------------------------------------------------|---------|---------------------------------------------------------| | HAPPY-01 | eT4rQm9XbK2wPzL7HdN3vA | 771502 | Rivera, Dolores | 1971-03-04 | Malignant neoplasm of breast (Stage IIB); Essential hypertension | C:2 O:12 DR:3 DocRef:1 Enc:2 MedReq:1 Proc:1 | fixture | normal import | | NO-LABS-01 | eB8kR2wQmX7zT4pL9HdN6C | 771518 | Chen, Mei | 1965-11-22 | Non-small cell lung cancer (Stage IIIA) | C:1 O:0 DR:1 Enc:1 | fixture | missing records | | MERGE-OLD-01 | eM3nW8qZrK5tY2vB7cX4dF | 771533 | Okafor, Adaeze | 1958-06-30 | Malignant tumor of colon | [retired] C:1 O:0 DR:0 Enc:1 | fixture | merge handling, retired record | | MERGE-NEW-01 | eM9pL4sVtN6uH3jK8mQ2wR | 771534 | Okafor, Adaeze | 1958-06-30 | Malignant tumor of colon (Stage IIIB) | C:1 O:3 DR:1 Enc:1 | fixture | merge handling, surviving record | | DUP-01 | eD5hJ7kL9mN2pQ4rS6tU8v | 771540 | Baptiste, Yves | 1949-09-12 | Malignant tumor of prostate (Stage IIA) | C:1 O:2 DR:1 Enc:1 | fixture | duplicate identifier | | DUP-02 | eD1aB3cD5eF7gH9iJ2kL4m | 771540 | Baptiste, Yvon | 1949-09-12 | Malignant tumor of prostate | C:1 O:1 DR:1 Enc:1 | fixture | duplicate identifier | | NO-DIAGNOSIS-01 | eN7yU5tR3eW1qA9sD7fG5h | 771556 | Halvorsen, Ingrid | 1980-01-17 | (none) | C:0 O:1 DR:0 Enc:1 | fixture | no cancer diagnosis on file | | PAGING-01 | eP2zX4cV6bN8mQ1wE3rT5y | 771562 | Adeyemi, Tunde | 1962-05-08 | Multiple myeloma (ISS stage II) | C:1 O:24 DR:0 Enc:1 | fixture | paging, more observations than one page | | GEN-BREAST-01 | 1215 | 772000 | Leannon79, Alla648 Cordelia715 | 1952-02-09 | Malignant neoplasm of breast (disorder) (Stage IIB); Medication review due (situation); Reports of violence in the environment (finding) | C:3 O:37 DR:8 Allergy:1 Appt:1 Enc:13 FamHx:1 Img:1 MedReq:2 Proc:16 Research:1 SvcReq:1 Spec:1 | fixture | generated, plus staging, biomarkers, report and imaging | | GEN-BREAST-02 | 1286 | 772001 | Larkin917, Cristen212 Larraine124 | 1972-01-27 | Malignant neoplasm of breast (disorder); Medication review due (situation); Part-time employment (finding); +1 more | C:4 O:17 DR:4 Enc:13 MedReq:3 Proc:17 | fixture | generated breadth, no oncology depth | | GEN-LUNG-01 | 1345 | 772002 | Nicolas769, Austin578 Keneth579 | 1966-07-12 | Non-small cell lung cancer (disorder) (Stage IIIA); Suspected lung cancer (situation); Medication review due (situation); +3 more | C:6 O:37 DR:19 Allergy:1 Appt:1 CarePlan:1 Enc:12 FamHx:1 Img:7 MedAdm:30 MedReq:30 Proc:30 Research:1 SvcReq:1 Spec:1 | fixture | generated, plus staging, biomarkers, report and imaging | | GEN-LUNG-02 | 1508 | 772003 | Halvorson124, Cherlyn665 Shavonda114 | 1978-04-13 | Non-small cell lung cancer (disorder) | C:1 O:30 DR:30 Enc:13 Img:17 MedAdm:30 MedReq:30 Proc:30 | fixture | generated breadth, no oncology depth | | GEN-COLON-01 | 1690 | 772004 | Hoeger474, Britt177 | 1986-08-21 | Bleeding from anus (disorder); Protracted diarrhea (finding); Medication review due (situation); +3 more | C:6 O:30 DR:15 CarePlan:2 Enc:12 MedAdm:12 MedReq:12 Proc:15 | fixture | generated breadth, no oncology depth | | GEN-COLON-02 | 1795 | 772005 | Jacobs452, Casie505 | 1957-10-16 | Recurrent rectal polyp (disorder); Anemia (disorder); Malignant neoplasm of colon (disorder); +1 more | C:4 O:30 DR:16 CarePlan:2 Enc:12 MedAdm:12 MedReq:12 Proc:30 | fixture | generated breadth, no oncology depth | ## Reading it **identifier** is the medical record number, in system `urn:oid:1.3.6.1.4.1.99999.2.1`. A patient may carry others; this is the one the identifier search is made with. **fhir id** shapes differ on purpose. The hand-authored patients carry long opaque strings, the generated ones short numbers assigned by the server the fixture pipeline normalises through. A client must treat a logical id as an opaque string, and a rig where every id looked alike would let one that did not get away with it. **diagnosis** lists the conditions on file with staged ones first, which is the closest derivable thing to the cancer without putting a marker in the data. For a patient with nothing staged it is the first few problems in store order, so read the handle for the intended diagnosis. **resources** counts what is in the patient's compartment. Condition, Observation and DiagnosticReport are always shown even at zero, because a zero is the point of some of these patients. `[retired]` means the Patient record is marked inactive. **origin** is `fixture` while the patient and everything of theirs came out of this fixture set, and `seeded` once anything was written at runtime. A restart reloads the fixtures and puts every row back to `fixture`. **staged for** is the only hand-declared column, and it lives in `cohort-staging.toml`. Each staging kind carries a predicate checked against the data whenever this table is built, so a claim that stops being true is rendered as such rather than quietly kept. ## Handles Handles are test API. They survive regeneration unchanged, so a test may hold one. They are deliberately absent from the FHIR data: reach a patient the way a client would reach one at a hospital, by identifier or by name and birth date, and use the `fhir id` column when you need the logical id directly.